Matthew Niemiller, Ph.D.
Associate Professor, Biological SciencesContact
301 Sparkman Drive
Shelby Center
Room 302M
Huntsville, AL 35899
Campus Map
256.824.3077
matthew.niemiller@uah.edu
Biography
Research in the Niemiller Lab focuses on the ecology, evolution, and conservation of life in caves and other subterranean habitats. Studies are often aimed at the ecological and evolutionary processes that underlie the origin and maintenance of multiple levels of biological diversity, from genes to populations to ecosystems, and how these processes ultimately affect conservation status and inform management decisions. Research topics in the lab range from evolution, speciation, and biogeography to spatial ecology and conservation assessments. Across these fields, we combine field observations and experiments with laboratory approaches to population and conservation genetics, and phylogenomics, primarily using subterranean organisms (both vertebrates and invertebrates) and ecosystems as models. Most of the species we study are of conservation concern and, in many cases, federally or state endangered. The ever-increasing risk of biodiversity loss from a plethora of threats, such as urbanization, groundwater pollution, and climate change, adds urgency to our need to understand the ecological and evolutionary responses and resiliency of subterranean biodiversity in the face of environmental change. The Niemiller Lab collaborates with researchers, conservation biologists, and land managers across the United States and around the globe as well as many local, state, and national agencies and organizations, such as U.S. Fish & Wildlife Service, U.S. Geological Survey, Tennessee Wildlife Resources Agency, Alabama Department of Conservation and Natural Resources, The Nature Conservancy, Southeastern Cave Conservancy Inc., National Speleological Survey, and San Antonio Zoo among others. The Niemiller Lab is currently accepting M.S. students in the Biological Sciences Program and Ph.D. students in the Biotechnology Program.
Current projects include developing and testing environmental DNA (eDNA) assays for state and federally endangered groundwater taxa, examining the persistence of eDNA in subterranean habitats, biological inventories of caves to address biodiversity knowledge gaps, demographic and life history studies of cave-dwelling salamanders, phylogenetics and genomics of cave-dwelling beetles and amphipods, and testing the efficacy of photo-id algorithms for capture-mark-recapture studies of salamanders, among others.
Dr. Niemiller received his B.S. (2003) and M.S. (2006) in Biology and Middle Tennessee State University and his Ph.D. (2011) in Ecology & Evolutionary Biology at the University of Tennessee-Knoxville. He was a Gaylord Donnelley Environmental Postdoctoral Fellow at Yale University (2011-2013) and completed additional postdoctoral training at the University of Kentucky (2013-2014) and the Illinois Natural History Survey at the University of Illinois (2014-2016). Before arriving at UAH in 2017, Dr. Niemiller was an associate ecologist at the Illinois Natural History Survey (2016-2017).
Education
- University of Tennessee, Department of Ecology & Evolutionary Biology, Knoxville, TN 37996, USA. Doctor of Philosophy, August 2011. Advisor: Benjamin M. Fitzpatrick.
- Middle Tennessee State University, Department of Biology, Murfreesboro, TN 37132, USA. Master of Science, May 2006. Advisor: Brian T. Miller
- Middle Tennessee State University, Murfreesboro, TN 37132, USA. Bachelor of Science in Biology, August 2003.
Recent Publications
Grant EHC, Mulder KP, Brand AB, Chambers DB, Wynn A, Capshaw G#,
Niemiller ML, Phillips JG, Kuchta SR, & Bell RC. In press. Speciation
with gene flow in a narrow endemic West Virginia cave salamander
(Gyrinophilus subterraneus). Conservation Genetics.
https://doi.org/10.1007/s10592-022-01445-7Mammola S, Meierhofer M, Borges P, Colado R, Culver D, Deharveng L,
Delic T, Di Lorenzo T, Dražina T, Ferreira R, Fiasca B, Fiser C,
Galassi D, Garzoli L, Gerovasileiou V, Griebler C, Halse S, Howarth F,
Isaia M, Johnson J, Komerički A, Martínez A, Milano F, Moldovan O,
Nanni V, Nicolosi G, Niemiller M, Pallarés S, Pavlek M, Piano E, Pipan
T, Sánchez Fernández D, Santangeli A, Schmidt S, Wynne J, Zagmajster
M, Zakšek V, & Cardoso P. In press. Toward evidence-based conservation
of subterranean ecosystems. Biological Reviews.
https://doi.org/10.1111/brv.12851Niemiller ML, Davis MA, Tan M, Apodaca JJ, Dooley KE, Cucalón RV,
Benito J, Niemiller KDK, Harden R, Thames D, & Istvanko D. 2022.
Mitochondrial DNA and population genomics reveal additional cryptic
diversity in the green salamander (subgenus Castaneides) species
complex. Frontiers in Conservation Science 3: 890859.
https://doi.org/10.3389/fcosc.2022.890859
Dooley KE, Niemiller KDK, Sturm N, & Niemiller ML. 2022. Rediscovery
and phylogenetic analysis of the Shelta Cave crayfish (Orconectes
sheltae Cooper & Cooper, 1997), a decapod (Decapoda, Cambaridae)
endemic to Shelta Cave in northern Alabama, USA. Subterranean Biology
43: 11–31. https://doi.org/10.3897/subtbiol.43.79993Ferreira RL, Bernard E, Júnior FW da C, Piló LB, Calux A, Souza-Silva
M, Barlow J, Pompeu PS, Cardoso P, Mammola S, García AM, Jeffery WR,
Shear W, Medellín RA, Wynne JJ, Borges PAV, Kamimura Y, Pipan T, Hajna
NZ, Sendra A, Peck S, Onac BP, Culver DC, Hoch H, Flot J-F, Stoch F,
Pavlek M, Niemiller ML, Manchi S, Deharveng L, Fenolio D, Calaforra
J-M, Yager J, Griebler C, Nader FH, Humphreys WF, Hughes AC, Fenton B,
Forti P, Sauro F, Veni G, Frumkin A, Gavish-Regev E, Fišer C, Trontelj
P, Zagmajster M, Delic T, Galassi DMP, Vaccarelli I, Komnenov M,
Gainett G, Tavares V da C, Kováč Ľ, Miller AZ, Yoshizawa K, Lorenzo
TD, Moldovan OT, Sánchez-Fernández D, Moutaouakil S, Howarth F,
Bilandžija H, Dražina T, Kuharić N, Butorac V, Lienhard C, Cooper SJB,
Eme D, Strauss AM, Saccò M, Zhao Y, Williams P, Tian M, Tanalgo K, Woo
K-S, Barjakovic M, McCracken GF, Simmons NB, Racey PA, Ford D,
Labegalini JA, Colzato N, Pereira MJR, Aguiar LMS, Moratelli R, Preez
GD, Pérez-González A, Reboleira ASPS, Gunn J, Cartney AM, Bobrowiec
PED, Milko D, Kinuthia W, Fischer E, Meierhofer MB, & Frick WF. 2022.
Brazilian cave heritage under siege. Science 375: 1238–1239.
https://doi.org/10.1126/science.abo1973Gladstone NS, Niemiller ML, Hutchins B, Schwartz B, Czaja A, Slay ME,
& Whelan NV. 2022. Subterranean freshwater gastropod biodiversity and
conservation in North America. Conservation Biology 36: e13722.
https://doi.org/10.1111/cobi.13722Niemiller ML, Carter ET, Gladstone NS, Niemiller KDK, Hayter LE, Engel
AS, Miller BT, & Fitzpatrick BM. 2021. The distribution, ecology, life
history, and conservation status of the Berry Cave salamander
(Gyrinophilus gulolineatus). Herpetological Conservation and Biology
16: 686–703.Wynne JJ, Howarth FG, Mammola S, Ferreira RL, Cardoso P, Di Lorenzo T,
Galassi DMP, Medellin RA, Miller BW, Sánchez-Fernández D, Bichuette
ME, Biswas J, Boonyanusith C, Borges PAV, Boston PJ, Cheeptham N,
Deharveng L, Eme D, Fenolio D, Fišer C, Fišer Z, Gon III S, Goudarzi
F, Griebler C, Halse S, Hoch H, Katz AD, Kováč L, Lilley TM, Manchi S,
Manenti R, Martínez A, Martinez WE, Meierhofer MB, Miller AZ, Moldovan
OT, Niemiller ML, Pipan T, Pellegrini TG, Phillips-Lander CM, Poot C,
Racey PA, de Rosário IA, Sendra A, Shear WA, Silva MS, Tian M, Taiti
S, Venarsky MP, Pakarati SY, Zagmajster M, & Zhao Y. 2021. A roadmap
for the conservation of the subterranean biome. Conservation Letters
14: e12834. https://doi.org/10.1111/conl.12834Fitzgerald DB, Smith DR, Culver DC, Feller D, Fong DW, Hajenga J,
Niemiller ML, Nolfi DC, Orndorff WD, Douglas B, Maloney KO, & Young
JA. 2021. Using expert knowledge to support Endangered Species Act
decision making for data-deficient species. Conservation Biology 35:
1627–1638. https://doi.org/10.1111/cobi.13694Niemiller KDK, Davis MA, & Niemiller ML. 2021. Addressing biodiversity
naivety using project-based learning with iNaturalist. Journal for
Nature Conservation 64: 126070.
https://doi.org/10.1016/j.jnc.2021.126070
